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Test Code CTB Mycobacteria and Nocardia Culture, Varies

Performing Laboratory

Mayo Clinic Laboratories in Rochester

Specimen Type

Varies


Necessary Information


1. Specimen source is required.

2. Alert the laboratory if Mycobacterium genavense is suspected, as this species requires addition of mycobactin J to the culture medium for optimal growth and recovery.



Specimen Required


Submit only 1 of the following specimens:

 

Specimen Type: Body fluid

Container/Tube: Sterile container

Specimen Volume: 1.5 mL

 

Specimen Type: Bone marrow

Container/Tube: Sterile container, or green top (lithium or sodium heparin)

Specimen Volume: Entire collection

 

Specimen Type: Gastric washing

Container/Tube: Sterile container

Specimen Volume: 10 mL

Collection Instructions: Neutralize specimen within 4 hours of collection with 100 mg of sodium carbonate per 5 to 10 mL of gastric wash.

 

Specimen Type: Respiratory

Sources: Bronchoalveolar lavage fluid, bronchial washing, sputum

Container/Tube: Sterile container

Specimen Volume: 3 mL

Collection Instructions:

1. Collect 3 respiratory specimens for acid-fast smears and culture in patients with clinical and chest X-ray findings compatible with tuberculosis.

2. These 3 specimens should be collected at 8 to 24-hour intervals (24 hours when possible) and should include at least 1 first-morning specimen.

 

Specimen Type: Stool

Supplies: Stool Collection Kit, Random (T635)

Container/Tube: Sterile container

Specimen Volume: 5 to 10 g

 

Specimen Type: Tissue

Container/Tube: Sterile container

Specimen Volume: 5 to 10 mm

Collection Instructions: Collect a fresh tissue specimen.

 

Specimen Type: Urine

Container/Tube: Sterile container

Specimen Volume: 20 to 50 mL

Collection Instructions: Collect a random urine specimen.

 

Fresh tissue or body fluid is the preferred specimen type instead of a swab specimen. Recovery of mycobacteria from swabs is generally very low yield.

Specimen Type: Swab

Sources: Wound, tissue, or body fluid

Container/Tube: Culture transport swab (noncharcoal) culturette, or Eswab

Specimen Volume: Adequate specimen

Collection Instructions:

1. Before collecting specimen, wipe away any excessive amount of secretion and discharge, if appropriate.

2. Obtain secretions or fluid from source with sterile swab.

3. If smear and culture are requested or both a bacterial culture and mycobacterial culture are requested, collect a second swab to maximize test sensitivity.


Central Peninsula Hospital Note:

Specimen will be rejected due to: 

Blood or fixed tissue; specimen in viral transport medium (including but not limited to M4, M5, BD viral transport media, thioglycolate broth); swab sources of nasal, sinus, ear, mouth, throat, or scalp; wood shaft or charcoal swab

Specimen Stability Information

Specimen Type Temperature Time
Varies Refrigerated (preferred) 7 days
  Ambient  7 days

Reference Values

Negative

Day(s) Performed

Monday through Sunday

CPT Code Information

87116-Mycobacterial Culture

87015-Mycobacteria Culture, Concentration (if appropriate)

87118-Id MALDI-TOF Mass Spec AFB (if appropriate)

87150-Id, Mtb Speciation, PCR (if appropriate)

87153-Mycobacteria Identification by Sequencing (if appropriate)

87176-Tissue Processing (if appropriate)

87150- Id, MTB complex Rapid PCR (if appropriate)

Report Available

42 to 70 days

Reject Due To

Blood or fixed tissue
Specimen in viral transport medium (including but not limited to M4, M5, BD viral transport media, thioglycolate broth)
Saliva
Swab sources of respiratory fluids (eg, sputum)
Swab sources of nasal, sinus, ear, mouth, throat, or scalp
Wood shaft or charcoal swab
Petri dish
Reject
 

Reflex Tests

Test ID Reporting Name Available Separately Always Performed
ISMY ID by 16S Sequencing No, (Bill Only) No
RMALM Id MALDI-TOF Mass Spec AFB No, (Bill Only) No
RTBSP Id, Mtb Speciation, PCR No, (Bill Only) No
TBT Concentration, Mycobacteria No, (Bill Only) No
TISSR Tissue Processing No, (Bill Only) No
LCTB Id, MTB complex Rapid PCR No, (Bill Only) No

Specimen Minimum Volume

See Specimen Required

Specimen Retention Time

Raw specimen 3 to 7 days; Isolates from positive cultures kept 1 year.